Information for 5-TCCTGCTGCC (Motif 15)

A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C
Reverse Opposite:
C T A G A T C G G T A C T C G A A T C G G T A C T G C A A C T G T C A G T C G A
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.579
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1209.1
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets47.4 +/- 23.3bp
Average Position of motif in Background50.8 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TCCTGCTGCC
----GCTTCC
 A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCCTGCTGCC----
-----CTGCCCGCA
 A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCTGCTGCC
NNGCAGCTGTC
 A C G T A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCTGCTGCC------
ACATGCTACCTAATAC
 A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCCTGCTGCC
---NGCTN--
 A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCTGCTGCC---
TGCAGCTGTCCCT
 A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C A C G T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCTGCTGCC
NNGCAGCTGTT
 A C G T A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGCTGCC--
AGATGCTRCTRCCHT
 A C G T A C G T A C G T A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCTGCTGCC
--CAGCTGNT
 A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTGCC---
TCNCCTGCTGNGNNN
 A C G T A C G T A G C T A G T C T G A C A C G T C A T G T A G C A G C T C A T G T A G C G A T C A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G