Information for 2-TGGGBRTTTCCTG (Motif 4)

C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
Reverse Opposite:
G T A C C G T A A C T G T A C G C T G A T G C A C G T A A G C T T G A C A T G C A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.718
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif25.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.3 +/- 30.3bp
Average Position of motif in Background46.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TGGGBRTTTCCTG
-GGGGATTTCC--
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TGGGBRTTTCCTG
-GGGAATTTCC--
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGGGBRTTTCCTG
NGGGGATTTCCC-
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGGGBRTTTCCTG
-GGGAATTTCC--
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TGGGBRTTTCCTG
-GGGGATTTCC--
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TGGGBRTTTCCTG--
-----ATTTCCTGTN
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:TGGGBRTTTCCTG--
-----ATTTCCTGTN
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGGGBRTTTCCTG-
----CACTTCCTGT
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGBRTTTCCTG
NNNATTGGGGGTNTCCT-
 A C G T A C G T A C G T A C G T A C G T C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGGGBRTTTCCTG--
---NNAYTTCCTGHN
 C G A T T A C G T A C G A T C G A C T G T C G A A C G T A C G T A G C T A T G C A G T C G C A T C A T G A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T