Information for 2-BCTCTGAGAGGMCGGG (Motif 3)

A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C A C T G A C T G A G T C A G T C G A C T A G T C A G C T A T G C C G T A A C T G C T G A A C T G T C G A
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.809
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 31.9bp
Average Position of motif in Background46.3 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG-
------GGGGGCGGGGC
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG
--CTTGAGTGGCT---
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG--
----GGCGGGGGCGGGGG
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:BCTCTGAGAGGMCGGG---
-----AGGGGGCGGGGCTG
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG----
---NAGANTGGCGGGGNGNA
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG--
---GGGNGGGGGCGGGGC
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG--
------GGGGGCGGGGCC
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:BCTCTGAGAGGMCGGG--
------TGGGGAAGGGCM
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:BCTCTGAGAGGMCGGG
------AGAGGAAGTG
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:BCTCTGAGAGGMCGGG
--ANTGCGGGGGCGGN
 A C G T A G T C A G C T A G T C A C G T A T C G C T G A A C T G C G T A C T A G A C T G G T A C T G A C A C T G A C T G A C T G
A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A