p-value: | 1e-9 |
log p-value: | -2.088e+01 |
Information Content per bp: | 1.849 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.11% |
Number of Background Sequences with motif | 31.3 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 31.1 +/- 24.7bp |
Average Position of motif in Background | 41.6 +/- 25.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0073.1_Hoxc9/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGTCCTTAAA--- GGAGGTCATTAATTAT |
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HOXC11/MA0651.1/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGTCCTTAAA- GGTCGTAAAAT |
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Hoxa11/MA0911.1/Jaspar
Match Rank: | 3 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGTCCTTAAA-- GGTCGTAAAATT |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGTCCTTAAA- -GTCGTAAAAT |
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HOXC12/MA0906.1/Jaspar
Match Rank: | 5 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGTCCTTAAA- GGTCGTAAAAA |
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HOXD11/MA0908.1/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGTCCTTAAA- -GTCGTAAAAA |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGTCCTTAAA---- TAAGGTCGTAAAATCCT |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGTCCTTAAA--- TAAAGTCGTAAAACGT |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGTCCTTAAA--- TAAAGTCGTAAAACAT |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGTCCTTAAA- AGTCGTAAAAA |
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