Information for 4-CCSGGAGCCTCCC (Motif 9)

A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
Reverse Opposite:
A T C G T A C G T A C G C G T A T A C G T A C G A G T C C A G T A T G C A G T C T A C G A C T G A T C G
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.660
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif635.1
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets53.7 +/- 20.1bp
Average Position of motif in Background50.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCSGGAGCCTCCC
--CGGAGC-----
 A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCSGGAGCCTCCC
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCSGGAGCCTCCC
ANCCGGAAGT-----
 A C G T A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCSGGAGCCTCCC
TGCCCCCGGGCA---
 A C G T A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCSGGAGCCTCCC
AACCGGAAGT-----
 A C G T A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCSGGAGCCTCCC
CCGGAAGTGGC--
 A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCSGGAGCCTCCC
ACCGGAAGTG----
 A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCSGGAGCCTCCC
NACCGGAAGT-----
 A C G T A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCSGGAGCCTCCC
----CAGCC----
 A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCSGGAGCCTCCC
GRTGMTRGAGCC----
 A C G T A C G T A C G T A T G C T G A C A T G C T C A G T A C G G T C A T C A G A T G C A T G C G C A T A T G C A T G C T A G C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T