Information for 19-CGTCAGCCVMMGCCCC (Motif 34)

A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
Reverse Opposite:
A T C G T A C G C A T G A T C G G T A C A C G T C A T G A C G T A T C G A C T G A T G C A G C T A C T G T C G A A G T C T A C G
p-value:1e-5
log p-value:-1.173e+01
Information Content per bp:1.698
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif784.9
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets50.6 +/- 28.3bp
Average Position of motif in Background50.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC
CCCCCGCCCCCGCC--
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC-
-----GGCCCCGCCCCC
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC
--TCCGCCCCCGCATT
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC
----AGCCTCAGGCA-
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC-
-----GCCACRCCCACY
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

KLF16/MA0741.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC
-----GCCACGCCCCC
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC
----CGCCTCAGGCA-
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGTCAGCCVMMGCCCC-
---CCCCCTTGGGCCCC
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C A C G T
A C G T A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGTCAGCCVMMGCCCC--
----NAGCCCCGCCCCCN
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGTCAGCCVMMGCCCC
----AGCCTCAGGCA-
 A T G C T A C G A G C T A G T C C T G A A T C G A G T C A T G C T G C A G T A C T G C A A C T G A T G C G A T C A G T C A T G C
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T