Information for 15-TCGGATCAGGCCG (Motif 30)

A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G C G T A
p-value:1e-6
log p-value:-1.448e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.7 +/- 25.2bp
Average Position of motif in Background40.5 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCGGATCAGGCCG
-NGGATTAN----
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCGGATCAGGCCG-------
------CAGGCCNNGGCCNN
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGGATCAGGCCG
GNGGATTAGN---
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGGATCAGGCCG
--GGATTAGC---
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCGGATCAGGCCG
CGCGCCGGGTCACGTA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCGGATCAGGCCG
-----CTAGGCCT
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCGGATCAGGCCG
NNGGATTAGN---
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCGGATCAGGCCG
AGAGCGGGGTCAAGTA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCGGATCAGGCCG
-CGGATTAN----
 A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCGGATCAGGCCG
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G T C A C T G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A