Information for 13-GTGGCGCHGCCGC (Motif 27)

T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
Reverse Opposite:
A T C G A G T C A C T G A C T G A G T C C A T G A C T G A G T C C T A G A G T C A G T C T G C A A G T C
p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.830
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif87.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets54.5 +/- 31.3bp
Average Position of motif in Background44.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTGGCGCHGCCGC
--TGCGCAGGCGC
 T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCGCHGCCGC
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCGCHGCCGC
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGGCGCHGCCGC-
----CGCAGCTGCG
 T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCGCHGCCGC
GGGGGCGGGGCC--
 A C G T T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCGCHGCCGC
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGGCGCHGCCGC--
AAGGKGRCGCAGGCA
 T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGGCGCHGCCGC--
---GCGCATGCGCAG
 T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGGCGCHGCCGC-----
---DCHCAGCAGGRGGCC
 T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGGCGCHGCCGC
AGGGGGCGGGGCTG-
 A C G T A C G T T A C G A C G T A C T G A C T G A G T C A C T G A G T C G T A C A C T G A G T C G T A C A C T G A T G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T