Information for 12-CACGCGATGGCGC (Motif 25)

A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G A G T C A G T C C G T A A G C T A T G C A C T G A G T C A C T G C A G T A C T G
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.7 +/- 27.0bp
Average Position of motif in Background58.0 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACGCGATGGCGC------
--NNNNTTGGCGCCGANNN
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACGCGATGGCGC
--TGCGCAGGCGC
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CACGCGATGGCGC------
--NNNNTTGGCGCCGANNN
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACGCGATGGCGC--
---GCGCATGCGCAG
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CACGCGATGGCGC---
--------GGCGCGCT
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACGCGATGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CACGCGATGGCGC----
-----TTTGGCGCCAAA
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACGCGATGGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CACGCGATGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CACGCGATGGCGC-
-----NTTGGCANN
 A G T C G C T A T G A C C T A G A G T C A T C G T C G A A C G T A C T G A C T G A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G