Information for 3-CGGAGCTGAA (Motif 14)

G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
Reverse Opposite:
A G C T C A G T A G T C G T C A A C T G A T G C C G A T A T G C A G T C C T A G
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.851
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif149.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets60.1 +/- 22.2bp
Average Position of motif in Background47.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGGAGCTGAA
CGGAGC----
 G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGAGCTGAA
CGCAGCTGCG
 G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGAGCTGAA--
CGGAAGTGAAAC
 G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A A C G T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGAGCTGAA---
-GGAAGTGAAAST
 G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A A C G T A C G T A C G T
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGAGCTGAA
NNACAGCTGC-
 A C G T G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGAGCTGAA-
GACAGCTGCAG
 G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGAGCTGAA
CAGCAGCTGN-
 A C G T G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGCTGAA---
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGGAGCTGAA
NNAGCAGCTGCT
 A C G T A C G T G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGAGCTGAA
NAHCAGCTGD-
 A C G T G A T C A C T G A T C G C G T A A T C G G T A C A C G T A C T G G T C A C T G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T