Information for 5-RGSTGASCGSGGWYCG (Motif 11)

C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
Reverse Opposite:
A G T C A C T G C T G A C G T A A G T C A G T C A T G C A G T C A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G C T
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.855
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 13.4bp
Average Position of motif in Background49.7 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--RGSTGASCGSGGWYCG--
NGAGGTCANNGAGTTCANNN
 A C G T A C G T C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RGSTGASCGSGGWYCG
NNNNTGACCCGGCGCG-
 A C G T C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:RGSTGASCGSGGWYCG
-RGKGGGCGKGGC---
 C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:RGSTGASCGSGGWYCG
NNAGGGGCGGGGTNNA
 C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:RGSTGASCGSGGWYCG
--CTGACCTTTG----
 C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-RGSTGASCGSGGWYCG
NANAAGGGCGTGGTC--
 A C G T C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:RGSTGASCGSGGWYCG
-RGTGGGYGTGGC---
 C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--RGSTGASCGSGGWYCG--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--RGSTGASCGSGGWYCG---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-RGSTGASCGSGGWYCG
NAAGGGGGCGTGGCTTN
 A C G T C T G A A C T G A T C G A C G T A C T G G T C A A T C G A G T C A C T G A T C G A C T G A C T G C G A T A G C T A G T C A C T G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A