Information for 3-CGGGCGCGCTCGGGGA (Motif 12)

A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
Reverse Opposite:
A C G T A T G C A G T C A G T C A T G C T A C G G T C A A T C G A T G C A T C G A T G C A C T G T A G C A G T C T A G C C T A G
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.748
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif44.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets53.9 +/- 26.8bp
Average Position of motif in Background56.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGGCGCGCTCGGGGA
--GGCGCGCT------
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.61
Offset:10
Orientation:forward strand
Alignment:CGGGCGCGCTCGGGGA
----------TGGGGA
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGGCGCGCTCGGGGA
--GGCGGGGGCGGGGG
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGGGCGCGCTCGGGGA
----TGCCCNGGGGCA
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGGCGCGCTCGGGGA
GGGGCTYGKCTGGGA-
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGGCGCGCTCGGGGA
--GGGGCCCAAGGGGG
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGGCGCGCTCGGGGA-
---TTGCCCTAGGGCAT
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A A C G T
A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGGGCGCGCTCGGGGA
----TGCCCTNGGGCA
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGGGCGCGCTCGGGGA
-GGGNGGGGGCGGGGC
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CGGGCGCGCTCGGGGA
-------GGGGGGGG-
 A G T C A T C G T C A G A T C G A G T C A T C G A T G C A T C G T A G C A C G T A T G C A T C G A C T G A C T G A T C G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T