Information for 3-TGCTGTTGCCGTCAGS (Motif 4)

A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G
Reverse Opposite:
T A G C A G T C C G A T A T C G C T G A G T A C C T A G A T C G A G T C G T C A C G T A A G T C G T C A C T A G G T A C C G T A
p-value:1e-20
log p-value:-4.834e+01
Information Content per bp:1.745
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 22.7bp
Average Position of motif in Background61.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCTGTTGCCGTCAGS
-GCTGTTACCCT----
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGCTGTTGCCGTCAGS
-GCTGTG---------
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGCTGTTGCCGTCAGS
GRTGMTRGAGCC------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGCTGTTGCCGTCAGS--
------TGCCCTNGGGCA
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGCTGTTGCCGTCAGS---
-----NTGCCCTAGGGCAA
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGCTGTTGCCGTCAGS
AGATGCTRCTRCCHT-
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TGCTGTTGCCGTCAGS--
------TGCCCTNGGGCA
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TGCTGTTGCCGTCAGS-
-----ATGCCCTGAGGC
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TGCTGTTGCCGTCAGS--
------TGCCCNGGGGCA
 A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGTTGCCGTCAGS
CCCCCTGCTGTG---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C A G T A C T G A T G C A G T C A C T G A G C T A T G C C G T A A C T G A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T