Information for 13-CCYKGCGAAR (Motif 29)

G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
Reverse Opposite:
A G C T A C G T G A C T A T G C T A C G A T G C T G A C C T G A T C A G C A T G
p-value:1e-5
log p-value:-1.352e+01
Information Content per bp:1.554
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets77.8 +/- 17.2bp
Average Position of motif in Background45.2 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCYKGCGAAR-
-CSTGGGAAAD
 G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCYKGCGAAR
NGTCCCNNGGGA--
 A C G T A C G T A C G T A C G T G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCYKGCGAAR-
-GGTGCCAAGT
 G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCYKGCGAAR
--TTGCCAAG
 G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCYKGCGAAR
ANTCCCTNGGGAAT
 A C G T A C G T A C G T A C G T G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCYKGCGAAR
-CGTGCCAAG
 G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCYKGCGAAR-
-----NGAAGC
 G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCYKGCGAAR
TTCTNMGGAA-
 A C G T G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCYKGCGAAR-
TTCTNNAGAANT
 A C G T G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A A C G T
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCYKGCGAAR
---TGCCAA-
 G T A C A G T C G A C T A C T G T A C G A T G C T A C G C T G A T G C A T C G A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T