Information for 5-CTCMGCTGGGTTCKYT (Motif 9)

A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
Reverse Opposite:
C T G A C T A G G T C A C A T G C G T A C G T A A G T C A T G C A G T C C G T A A C T G A G T C C A T G A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 24.4bp
Average Position of motif in Background61.6 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCMGCTGGGTTCKYT
CCTCACCTG--------
 A C G T A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCMGCTGGGTTCKYT
GGGGCTYGKCTGGGA-----
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCMGCTGGGTTCKYT
CACAGCAGGGGG----
 A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCMGCTGGGTTCKYT
DCHCAGCAGGRGGCC--
 A C G T A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCMGCTGGGTTCKYT
DCTCAGCAGG-------
 A C G T A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCMGCTGGGTTCKYT
-TCCCCTGGGGAC---
 A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCMGCTGGGTTCKYT
NGTCCCNNGGGA-----
 A C G T A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCMGCTGGGTTCKYT
CGCAGCTGCG------
 A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCMGCTGGGTTCKYT
NAHCAGCTGD-------
 A C G T A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCMGCTGGGTTCKYT
NVCAGCTGBBNN----
 A G T C A C G T A G T C G T A C T C A G A G T C C G A T A C T G A T C G A C T G G A C T A C G T G T A C A C G T A G T C A G C T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T