Information for 22-CAGGCTACTGACA (Motif 43)

A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.0 +/- 11.0bp
Average Position of motif in Background47.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CAGGCTACTGACA-
-------TTGACAG
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTACTGACA--
ACATGCTACCTAATAC
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTACTGACA--
ACTTGCTACCTACACC
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTGACA--
TNNTGCTACTGTNNNN
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAGGCTACTGACA-
------RHTGWCAR
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAGGCTACTGACA---
------VBTGWCAGCB
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGCTACTGACA-
NAGGTCANTGACCT
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGGCTACTGACA--
---GGTGYTGACAGS
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTACTGACA--
CNNNGCTACTGTANNN
 A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGGCTACTGACA
---CCAACTGCCA
 A G T C C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A