Information for 2-GCCGCCAGWGGGCGCC (Motif 4)

A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C
Reverse Opposite:
T C A G A C T G A G T C A C T G A G T C A T G C G T A C G C A T A G T C A G C T A T C G A T C G A G T C C T A G A C T G A G T C
p-value:1e-12
log p-value:-2.913e+01
Information Content per bp:1.808
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.6 +/- 20.0bp
Average Position of motif in Background47.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCCGCCAGWGGGCGCC----
GCCASCAGGGGGCGCYVNNG
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCAGWGGGCGCC-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCAGWGGGCGCC--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCGCCAGWGGGCGCC-----
-----TTGGGGGCGCCCCTAG
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGWGGGCGCC
-CCGCCCAAGGGCAG-
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCGCCAGWGGGCGCC
--TGCCCNGGGGCA--
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCGCCAGWGGGCGCC---
--NNNAAGGGGGCGGGNNN
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCGCCAGWGGGCGCC
--TGTCAGGGGGCG--
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCCGCCAGWGGGCGCC
----TCGGTGGTCGCN
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGWGGGCGCC
-TCACCTCTGGGCAG-
 A C T G A G T C A G T C C T A G A T G C T A G C C T G A A C T G C G T A A C T G A T C G A C T G A G T C C T A G A G T C A G T C
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T