Information for 18-CGARKCTGRGAST (Motif 33)

A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A G T C A G C T A G T C C G T A A C T G G T C A A G T C A C G T A G T C A T C G
p-value:1e-7
log p-value:-1.726e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 22.1bp
Average Position of motif in Background81.9 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGARKCTGRGAST---
-GNNACCGAGAATNNN
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGARKCTGRGAST
TCGAAACCGAAACT
 A C G T A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGARKCTGRGAST---
-NNNACCGAGAGTNNN
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

IRF9/MA0653.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGARKCTGRGAST
AACGAAACCGAAACT
 A C G T A C G T A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGARKCTGRGAST
-GAAACTGAAACT
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGARKCTGRGAST-
---TGCTGTGATTT
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGARKCTGRGAST
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGARKCTGRGAST-
----GCAGTGATTT
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGARKCTGRGAST
-GAAAGTGAAAGT
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGARKCTGRGAST
-GAGSCCGAGC--
 A T G C A C T G C G T A C T A G A C G T A G T C A C G T A C T G C T G A A C T G C G T A A T C G A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T