Information for 16-CGSSGGAWYCCSCGCS (Motif 31)

A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A C T G A T C G A C T G A C T G T C A G C G A T A C G T A G T C A G T C A T G C A T C G A G T C A C T G
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 7.7bp
Average Position of motif in Background68.3 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGSSGGAWYCCSCGCS
-GGGGGAATCCCC---
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGSSGGAWYCCSCGCS
-AGGGGAATCCCCT--
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGSSGGAWYCCSCGCS
-AGGGGAATCCCCT--
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGSSGGAWYCCSCGCS
---GGAAATCCCC---
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGSSGGAWYCCSCGCS---
-----GACCCCCCGCGAAG
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGSSGGAWYCCSCGCS------
-----TACGCCCCGCCACTCTG
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGSSGGAWYCCSCGCS
GGCGGGAARN------
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGSSGGAWYCCSCGCS
----GGAAANCCCC--
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGSSGGAWYCCSCGCS
------DTTTCCCGCC
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGSSGGAWYCCSCGCS
-----GAGSCCGAGC-
 A G T C A C T G A T G C A T C G A C T G A C T G G T C A C G T A A G T C A G T C A G T C A T G C A G T C A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T