Information for 12-GCGCGCCTCTRTARAG (Motif 24)

A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
Reverse Opposite:
A G T C A C G T A G C T A G C T T C G A A G C T C G T A C T A G C G T A A C T G T A C G A T G C C A T G G T A C A C T G A T G C
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.763
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.7 +/- 10.5bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCTCTRTARAG
NTCGCGCGCCTTNNN----
 A C G T A C G T A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCTCTRTARAG
ANCGCGCGCCCTTNN----
 A C G T A C G T A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCTCTRTARAG
AGCGCGCC---------
 A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCGCGCCTCTRTARAG
----GNCTATAAAAGG
 A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCCTCTRTARAG
TGGCGCGCGCGCCTGA----
 A C G T A C G T A C G T A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGCCTCTRTARAG
GGNGCGNCTGTTNNN--
 A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----GCGCGCCTCTRTARAG
CAAAGGCGTGGCCAG------
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.48
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCGCCTCTRTARAG
NNGCNCTGCGCGGC---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCTCTRTARAG
NNCGCGTGNN---------
 A C G T A C G T A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCTCTRTARAG
TGCGTG-----------
 A C G T A T C G A G T C A C T G G A T C A T C G A T G C A G T C A C G T A G T C A C G T C T G A A C G T C T G A C T G A G T C A A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T