Information for 13-TAGCCAAAAGCTC (Motif 21)

A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A G C T A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 27.6bp
Average Position of motif in Background51.7 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGCCAAAAGCTC
-TGCCAA------
 A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGCCAAAAGCTC
CGTGCCAAG-----
 A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAGCCAAAAGCTC--
AAGGTCAAAAGGTCAA
 A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGCCAAAAGCTC-
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGCCAAAAGCTC
ACTAGCCAATCA---
 A C G T A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGCCAAAAGCTC
GGTGCCAAGT----
 A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAGCCAAAAGCTC
-AGCCTCAGGCA-
 A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAGCCAAAAGCTC-
GAGGTCAAAAGGTCA
 A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

RARA/MA0729.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAGCCAAAAGCTC----
GAGGTCAAAAGGTCAATG
 A C G T A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAGCCAAAAGCTC-----
--TCTCAAAGGTCACCTG
 A C G T C T G A A C T G A G T C A G T C C G T A C G T A C G T A C T G A C T A G A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G