Information for 11-CCCCGCGCSGCTCCCT (Motif 17)

A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
Reverse Opposite:
G T C A A C T G A C T G A T C G C G T A A T C G A G T C A T C G A C T G A G T C A C T G A T G C A C T G T A C G A C T G C T A G
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 19.8bp
Average Position of motif in Background45.2 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCGCSGCTCCCT
GACCCCCCGCTGCGC---
 A C G T A C G T A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:CCCCGCGCSGCTCCCT
---------GCTCCG-
 A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCGCSGCTCCCT
GACCCCCCGCTGTGC---
 A C G T A C G T A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCCGCGCSGCTCCCT
-AGCGCGCC-------
 A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGCGCSGCTCCCT
NNGCNCTGCGCGGC-----
 A C G T A C G T A C G T A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCGCSGCTCCCT
TACGCCCCGCCACTCTG-
 A C G T A C G T A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCCCGCGCSGCTCCCT
-----CGCAGCTGCG-
 A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCCCGCGCSGCTCCCT
---GGCCCCGCCCCC-
 A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCCCGCGCSGCTCCCT
------GCCCCGCCCC
 A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCCGCGCSGCTCCCT
-CCCCCTTGGGCCCC-
 A G T C A G T C A T G C G T A C A T C G A G T C A C T G A G T C A T G C A C T G A T G C A C G T A T G C A G T C A G T C A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T