Information for 7-AGATTGTTCTGGG (Motif 15)

C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C T G C G T A C G T A A G T C C G T A C T G A A C G T A G T C A G C T
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.6 +/- 33.8bp
Average Position of motif in Background56.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGATTGTTCTGGG
--ATTGTTA----
 C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGATTGTTCTGGG
--ATTGTT-----
 C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGATTGTTCTGGG
AANTTATTGTTCTNNA
 A C G T A C G T A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGATTGTTCTGGG
AAAATTGTTATGAA
 A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGATTGTTCTGGG
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGATTGTTCTGGG
---CTGTTCCTGG
 C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGATTGTTCTGGG
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGATTGTTCTGGG-
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGATTGTTCTGGG-
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGATTGTTCTGGG-
TAGAANVTTCTAGAA
 A C G T C T G A C T A G C G T A A G C T A C G T A C T G A C G T A C G T A G T C G C A T A C T G A C T G A C T G A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A