p-value: | 1e-11 |
log p-value: | -2.655e+01 |
Information Content per bp: | 1.776 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 27.2 +/- 16.1bp |
Average Position of motif in Background | 35.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SA0003.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTCAGADACAGTVAGA- AANGTGAAGNANNGTNAAGG |
|
|
|
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTCAGADACAGTVAGA -TCAGNGAGCGTGAC- |
|
|
|
SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTCAGADACAGTVAGA AGGTGNCAGACAG----- |
|
|
|
Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCAGADACAGTVAGA AAGGTCACGAAAGGTCA-- |
|
|
|
MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCAGADACAGTVAGA GTCATN---------- |
|
|
|
MEIS1/MA0498.2/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTCAGADACAGTVAGA NTGTCAN----------- |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCAGADACAGTVAGA NTGATTGACAGN---- |
|
|
|
MEIS2/MA0774.1/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GTCAGADACAGTVAGA -------GCTGTCAA- |
|
|
|
PH0141.1_Pknox2/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTCAGADACAGTVAGA-- --AAGCACCTGTCAATAT |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTCAGADACAGTVAGA -TGAGTGACAGSC--- |
|
|
|