Information for 5-AATCTTCAVATTA (Motif 11)

G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A A C G T A T G C A C G T A C T G C G T A C G T A A C T G G T C A A C G T C A G T
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.4 +/- 15.7bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AATCTTCAVATTA-
--TAATCHGATTAC
 G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A A C G T
A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AATCTTCAVATTA-
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATCTTCAVATTA-
AAGTCAGCANTTTTN
 A C G T G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATCTTCAVATTA
HWWGTCAGCAWWTTT
 A C G T A C G T G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AATCTTCAVATTA
CTGAGTCAGCAATTT-
 A C G T A C G T A C G T G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATCTTCAVATTA-
--TAATYNRATTAR
 G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A A C G T
A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATCTTCAVATTA-
AATATGCAAATTAG
 G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AATCTTCAVATTA
-ATATTTACATA-
 G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AATCTTCAVATTA
-ATATGCAAAT--
 G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AATCTTCAVATTA-
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C C G A T A C G T A G T C C G T A T A C G C G T A C G A T A C G T G T C A A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T