Information for 1-TAATTATTGTGYTYCA (Motif 1)

G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
Reverse Opposite:
A C G T A C T G T C G A C G T A C T G A A T G C G T C A G T A C C G T A C G T A G A C T G C T A C G T A A G C T A C G T C G T A
p-value:1e-14
log p-value:-3.336e+01
Information Content per bp:1.717
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.1 +/- 31.0bp
Average Position of motif in Background45.8 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAATTATTGTGYTYCA
AANTTATTGTTCTNNA
 G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAATTATTGTGYTYCA
GTATCTATTGTTCTTTA
 A C G T G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAATTATTGTGYTYCA
-AATTATT--------
 G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAATTATTGTGYTYCA
--CTCATTGTC-----
 G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAATTATTGTGYTYCA
NNTTTATTGTTCTNNN
 G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAATTATTGTGYTYCA-
CNNNTATTGTTCNNNNN
 G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TAATTATTGTGYTYCA--
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAATTATTGTGYTYCA
ANNTCTATTGTTCNNNA
 A C G T G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAATTATTGTGYTYCA-
---TAATTGTTCTAAAC
 G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A A C G T
A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAATTATTGTGYTYCA
GGAAAAATTGTTAGGAA
 A C G T G C A T C G T A C T G A G C A T C G A T C T G A A C G T A C G T A C T G A C G T A T C G G A C T A C G T A G C T A G T C T C G A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A