Information for 1-ACTGTCTTGA (Motif 8)

C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C C G T A C G T A A C T G G C T A G T A C C G T A A T C G C G A T
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.852
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif126.6
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets48.8 +/- 25.9bp
Average Position of motif in Background50.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTGTCTTGA
-CTGTCTGG-
 C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACTGTCTTGA--
--TGTCTAGACG
 C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A A C G T A C G T
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTCTTGA----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACTGTCTTGA
CCAACTGCCA---
 A C G T A C G T A C G T C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACTGTCTTGA
VBSYGTCTGG-
 A C G T C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ACTGTCTTGA
CGACCAACTGCCGTG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTGTCTTGA
-TWGTCTGV-
 C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACTGTCTTGA
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACTGTCTTGA
-NTGTCAN--
 C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTCTTGA
CCAACTGCCA---
 A C G T A C G T A C G T C G T A A T G C C G A T A C T G C G A T A G T C A C G T A C G T A T C G C T G A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T