Information for 20-GASAGGYCRAGGA (Motif 40)

A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A G C T A C T G C T A G A G T C A G T C A C G T A T G C A C G T A G T C
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.900
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 24.8bp
Average Position of motif in Background75.3 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GASAGGYCRAGGA--
---AGGTCAAGGTCA
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GASAGGYCRAGGA---
--CAGGCCNNGGCCNN
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GASAGGYCRAGGA--
---AGGTCAAGGTCA
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GASAGGYCRAGGA
---AGGCCTAG--
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GASAGGYCRAGGA
--GAGSCCGAGC-
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GASAGGYCRAGGA
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GASAGGYCRAGGA
---AGGCCTNG--
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GASAGGYCRAGGA
-AGRGGTCA----
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GASAGGYCRAGGA
CAAAGGTCAAGGG
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GASAGGYCRAGGA
-TRAGGTCA----
 A C T G C G T A A T C G C G T A A C T G A C T G A G T C A G T C T C A G C G T A A C T G A C T G C G T A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T