Information for 7-CGTGACTGTC (Motif 37)

A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A A T G C C G T A A C T G A C G T A T G C C G T A A G T C A C T G
p-value:1e-8
log p-value:-1.854e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.5 +/- 23.8bp
Average Position of motif in Background46.7 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CGTGACTGTC
NCGTGACN---
 A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGTGACTGTC
NCACGTGACN---
 A C G T A C G T A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGTGACTGTC
NCACGTGACN---
 A C G T A C G T A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTGACTGTC---
-BTGABTGACAGS
 A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGACTGTC
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGTGACTGTC
GTCACGTGAC----
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CGTGACTGTC--
-----NTGTCAN
 A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTGACTGTC---
-NTGATTGACAGN
 A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------CGTGACTGTC
TCAGNGAGCGTGAC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGTGACTGTC
ATCACGTGAC----
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A T C G C G T A G T A C A C G T A T C G A C G T A G T C
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T