Information for 3-GGVHTTGGCT (Motif 18)

T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T
Reverse Opposite:
C G T A A C T G T G A C G A T C C G T A T C G A C A G T A C T G T A G C A G T C
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.520
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif8.37%
Number of Background Sequences with motif1553.1
Percentage of Background Sequences with motif3.19%
Average Position of motif in Targets52.8 +/- 26.4bp
Average Position of motif in Background50.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.85
Offset:4
Orientation:forward strand
Alignment:GGVHTTGGCT
----TTGGCA
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:GGVHTTGGCT--
---NTTGGCANN
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGVHTTGGCT--
--NNTTGGCANN
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GGVHTTGGCT---
-TGATTGGCTANN
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGVHTTGGCT-
--GGTTGGCAT
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGVHTTGGCT
CCGATTGGCT
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGVHTTGGCT-
---CTTGGCAA
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGVHTTGGCT--
----TWGTCTGV
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGVHTTGGCT-
---CTAGGCCT
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGVHTTGGCT-
------NGCTN
 T C A G A T C G T G A C G T C A A C G T C G A T C T A G A C T G T G A C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G