Information for 4-CTAGGGCTAAGGCAGG (Motif 4)

A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C A G T A C T G A G T C A G T C A C G T A G C T C T G A A C T G A G T C A T G C A G T C C G A T C T G A A C T G
p-value:1e-14
log p-value:-3.249e+01
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.4 +/- 20.0bp
Average Position of motif in Background40.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG---
--------AAGGCAAGTGT
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG
---AGCCTCAGGCA--
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG
---AGCCTCAGGCA--
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG
-TAGGGCAAAGGTCA-
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG
---CGCCTCAGGCA--
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGGGCTAAGGCAGG
CTAGGCCT--------
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGGGCTAAGGCAGG
CNAGGCCT--------
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG-
-----GCTGASTCAGCA
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTAGGGCTAAGGCAGG
GTAGGGCAAAGGTCA-
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTAGGGCTAAGGCAGG
-TGGGGCAAAGGTCA-
 A G T C A G C T C G T A C T A G A T C G A C T G A G T C A G C T T C G A C G T A A C T G A C T G G T A C G C T A A C T G A C T G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T