Information for 3-YMAATGASWKYCSARG (Motif 3)

A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
Reverse Opposite:
A G T C A G C T A G C T A T C G A C T G T C A G G T A C C G A T A T G C A C G T A T G C C T G A A G C T A C G T A C T G C T A G
p-value:1e-15
log p-value:-3.541e+01
Information Content per bp:1.773
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.9 +/- 33.9bp
Average Position of motif in Background46.0 +/- 47.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-YMAATGASWKYCSARG
TTGAATGAAATTCGA--
 A C G T A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
--CATGAC--------
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------YMAATGASWKYCSARG
AAATGGACCAATCAG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
CAAATCACTG------
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YMAATGASWKYCSARG
AGCCAATCGG--------
 A C G T A C G T A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
-AAATCACTGC-----
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

LHX9/MA0701.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
CCAATTAA--------
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A G T C G A T C G T C A C G T A A C G T A C G T C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
-AAATCACAGCA----
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

EN1/MA0027.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
CTAATTAG--------
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YMAATGASWKYCSARG
CCAATTAG--------
 A G T C G T A C C G T A C T G A A G C T A T C G C G T A A T C G C G T A A C T G A G T C T G A C A T G C C T G A T C G A A C T G
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T