Information for 12-AGCACGTACTCAC (Motif 24)

C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C T G A C G T C T G A A G T C A C T G A C G T A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.086e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 20.9bp
Average Position of motif in Background18.4 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGCACGTACTCAC
-GCACGTACCC--
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCACGTACTCAC
-GCACGTAY----
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGCACGTACTCAC
-GCACGTNC----
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCACGTACTCAC
BGCACGTA-----
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCACGTACTCAC
AGCGGCACACACGCAA
 A C G T A C G T A C G T C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0043.1_Max_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCACGTACTCAC
CCNNANCACGTGGTCN-
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCACGTACTCAC----
GGYAGCAYDTGCTDCCCNNN
 A C G T A C G T A C G T C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCACGTACTCAC
ACCACGTGCTC--
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCACGTACTCAC
NGCACGTGNT---
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCACGTACTCAC
ACCACGTGCT---
 C G T A C T A G A G T C C G T A A G T C C T A G A G C T C G T A A G T C A C G T G T A C C G T A A G T C
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T A C G T A C G T