Information for 11-RRTGYTACMRCRRAMC (Motif 22)

C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A G C T A C T G A G C T A C G T A C T G A C G T C G T A C T G A A G T C C T G A A G C T A G C T
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 24.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RRTGYTACMRCRRAMC
NTTGATACATT-----
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RRTGYTACMRCRRAMC
-ATGTCACAACAACAC
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RRTGYTACMRCRRAMC--
--ATTTACGACAAATAGC
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C A C G T A C G T
A C G T A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:RRTGYTACMRCRRAMC
----AAACCGCAAA--
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RRTGYTACMRCRRAMC
AGAGRRACAGCWGAC-
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:RRTGYTACMRCRRAMC
NATGTTGCAA------
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:RRTGYTACMRCRRAMC-
--KGTTGCTAGGMAACA
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---RRTGYTACMRCRRAMC
ANNNATGATACCCCATC--
 A C G T A C G T A C G T C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RRTGYTACMRCRRAMC
AGATGCTRCTRCCHT--
 A C G T C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:RRTGYTACMRCRRAMC
---NWAACCACADNN-
 C T G A C T G A A G C T A C T G A G C T A C G T C G T A A G T C G T C A C T G A A G T C C T G A T C A G C G T A G T A C A G T C
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T