Information for 9-ACACGTGTGGGCA (Motif 18)

C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A G T C A G T C T C G A A G T C C G T A A G T C A T C G A C G T A C T G C G A T
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 9.0bp
Average Position of motif in Background19.2 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTGGGCA
AACACGTGTT----
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTGGGCA
NVCACGTG------
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTGGGCA
GHCACGTG------
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACACGTGTGGGCA
ACACGTGC-----
 C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACACGTGTGGGCA
-CACGTG------
 C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGTGGGCA
NACACGTGCN----
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTGGGCA
GNCACGTG------
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACACGTGTGGGCA
TCACGTGC-----
 C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGTGGGCA
NNCACGTGGT----
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGTGGGCA
NGCACGTGNT----
 A C G T C G T A A G T C C G T A A T G C A C T G A C G T A C T G A G C T A C T G A C T G A C T G A T G C C G T A
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T A C G T