Information for 7-GGHCGGTGGCGCG (Motif 15)

A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
Reverse Opposite:
A G T C A C T G A T G C T A C G A T G C A T G C C G T A A G T C G T A C A C T G C A G T A G T C A T G C
p-value:1e-10
log p-value:-2.315e+01
Information Content per bp:1.759
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.6 +/- 26.6bp
Average Position of motif in Background56.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGHCGGTGGCGCG
SDGCAGGTGCNS--
 A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGHCGGTGGCGCG--
GCGGAGGTGTCGCCTC
 A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGHCGGTGGCGCG
GGGGGCGGGGCC---
 A C G T A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGHCGGTGGCGCG
TGGCACGTGCCG--
 A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGHCGGTGGCGCG-----
-NAGANTGGCGGGGNGNA
 A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGHCGGTGGCGCG
TGGCACGTGCCA--
 A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGHCGGTGGCGCG
NNCAGGTGNN---
 A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGHCGGTGGCGCG
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GGHCGGTGGCGCG--
-------GGCGCGCT
 A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGHCGGTGGCGCG
NAGGTCANTGACCT-
 A C G T A C G T A T C G A C T G G T C A T G A C A C T G T C A G A C G T A T C G A T C G A G T C A T C G G T A C C T A G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T