Information for 6-CCGGTTTTCC (Motif 10)

A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C
Reverse Opposite:
A C T G T C A G T G C A T G C A G T C A T G C A G T A C A T G C T A C G T C A G
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.678
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.31%
Number of Background Sequences with motif965.2
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets46.2 +/- 24.9bp
Average Position of motif in Background49.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CCGGTTTTCC-
----TTTTCCA
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CCGGTTTTCC
NAAACCGGTTTT--
 A C G T A C G T A C G T A C G T A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCGGTTTTCC
GGGGATTTCC
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CCGGTTTTCC---
---ATTTTCCATT
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

TFCP2/MA0145.3/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCGGTTTTCC
AAACCGGTTT---
 A C G T A C G T A C G T A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CCGGTTTTCC---
---ATTTTCCATT
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CCGGTTTTCC---
---ATTTTCCATT
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGGTTTTCC
GGGAATTTCC
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGGTTTTCC
GGGGATTTCC
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCGGTTTTCC---
---ATTTTCCATT
 A G T C A T G C T A C G C A T G A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T