Information for 8-GGCCACTGGSTTT (Motif 5)

C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
Reverse Opposite:
T G C A C T G A C T G A A T G C G T A C A G T C C T G A A T C G C A G T C T A G A C T G T A G C A G T C
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.707
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 22.0bp
Average Position of motif in Background55.0 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCACTGGSTTT
NAGGTCANTGACCT-
 A C G T A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCACTGGSTTT
CNNNGCTACTGTANNN
 A C G T A C G T A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCCACTGGSTTT
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCCACTGGSTTT
----GCTGTG---
 C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCCACTGGSTTT
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCCACTGGSTTT-
GGGTCAACGAGTTCA
 A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCCACTGGSTTT
--GGTCTGGCAT-
 C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACTGGSTTT-
RGSMTBCTGGGAAAT
 A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGCCACTGGSTTT----
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACTGGSTTT-
TGGACTTTGNNCTCN
 A C G T C T A G A T C G T G A C G A T C G T C A A T G C A G C T A C T G C A T G A T C G A G C T A G C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T