Information for 24-CGCTCTCCACAAG (Motif 41)

G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C G T A C T G A T C G C G T A A C T G C G T A A C T G A G T C A C T G
p-value:1e-5
log p-value:-1.209e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 25.3bp
Average Position of motif in Background55.9 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGCTCTCCACAAG
----ATCCAC---
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCTCTCCACAAG
NSCACTYVAV---
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCTCTCCACAAG
TCCAATCCACA--
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGCTCTCCACAAG
AASCACTCAA----
 A C G T G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGCTCTCCACAAG----
-NNTTTGCACACGGCCC
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGCTCTCCACAAG-
--NWAACCACADNN
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCTCTCCACAAG
RSCACTYRAG---
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCTCTCCACAAG
-SSAATCCACANN
 G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCTCTCCACAAG-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCTCCACAAG--------
ACCGCCNTCCACGTGTANNGACA
 A C G T A C G T G T A C A C T G A G T C C G A T A G T C A C G T A T G C A G T C C G T A A G T C G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A