Information for 23-CCCAGGCTGSAGCCTK (Motif 30)

A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
Reverse Opposite:
G T C A C T G A T A C G A C T G A G T C A C G T A T C G A G T C C G T A A C T G A T G C A G T C G C A T A C T G A C T G T C A G
p-value:1e-7
log p-value:-1.778e+01
Information Content per bp:1.804
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.4 +/- 28.8bp
Average Position of motif in Background55.0 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
--GRTGMTRGAGCC--
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
---------CAGCC--
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
--TWGTCTGV------
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
---GGGCGGGACC---
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCCAGGCTGSAGCCTK
NNVDGGGYGGGGCYN-
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
--CTGTCTGG------
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCCAGGCTGSAGCCTK
-------CGGAGC---
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
--GGGGCCGAGGCCTG
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCCAGGCTGSAGCCTK
---TGCCTGAGGCN--
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCCAGGCTGSAGCCTK
VBSYGTCTGG------
 A G T C G T A C G T A C C G T A A C T G A T C G A G T C A C G T A C T G A T G C C G T A A C T G A G T C A T G C A G C T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T