Information for 11-AAAGGTCACWCTC (Motif 11)

C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
Reverse Opposite:
A C T G C T G A A T C G C G T A A T C G C G A T A C T G C T G A G T A C A G T C A C G T A C G T A G C T
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.809
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.6 +/- 28.4bp
Average Position of motif in Background54.6 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGTCACWCTC
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCACWCTC
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AAAGGTCACWCTC
-AAGGTCAC----
 C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCACWCTC
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCACWCTC
CAAAGGTCAG----
 A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGTCACWCTC
TCAAGGTCAN----
 A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAGGTCACWCTC
CAAGGHCANV---
 C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAAGGTCACWCTC
TRAGGTCA-----
 C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCACWCTC
TCAAGGTCAT----
 A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AAAGGTCACWCTC
TGGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G A C T G A G C T A G T C C G T A T A G C C G A T A T G C G A C T T A G C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T