Information for 1-GGKCAAAGGT (Motif 1)

C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T
Reverse Opposite:
T G C A G T A C G A T C A G C T A G C T A G C T C A T G T G C A G T A C A G T C
p-value:1e-71
log p-value:-1.656e+02
Information Content per bp:1.647
Number of Target Sequences with motif234.0
Percentage of Target Sequences with motif30.12%
Number of Background Sequences with motif3786.0
Percentage of Background Sequences with motif7.94%
Average Position of motif in Targets50.5 +/- 24.6bp
Average Position of motif in Background50.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---GGKCAAAGGT--
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--GGKCAAAGGT--
TGGGGCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GGKCAAAGGT--
TAGGGCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GGKCAAAGGT--
GAGGTCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---GGKCAAAGGT--
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GGKCAAAGGT--
GAGGTCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GGKCAAAGGT--
GGGGTCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GGKCAAAGGT--
GGGGTCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GGKCAAAGGT--
GGGGTCAAAGGTCA
 A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GGKCAAAGGT----
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T C T A G C A T G A C G T G T A C T C G A T C G A C T G A C T A G C A T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C