Information for 1-CGGGTTGACT (Motif 8)

A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T G T A C C G T A G T C A A G T C A G T C A G T C A C T G
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.942
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.0 +/- 26.5bp
Average Position of motif in Background47.0 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGGGTTGACT---
----TTGACTTTT
 A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGTTGACT--
CNTGTTTACATA
 A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGGTTGACT
ATGGGGTGAT-
 A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTTGACT-
GTGGCGTGACNG
 A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGGTTGACT---
--GGATGACTCAT
 A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGGGTTGACT--
-----TGACTCA
 A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGGTTGACT-----
CCTTAGTTAACTAAAAT
 A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGGGTTGACT---
--GGATGACTCAT
 A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTTGACT
ATGGGGTGAT-
 A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGGGTTGACT----
--GGATGACTCATC
 A G T C A C T G A C T G A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C