Information for 4-CTKAAWACARTCY (Motif 5)

A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A G T C A G C T A C T G C G A T C G A T A C G T A G C T G T A C C G T A A C T G
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 20.8bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTKAAWACARTCY
--GTAAACAAT--
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTKAAWACARTCY
----NAACAAT--
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTKAAWACARTCY--
NNTNANAACAATTNNA
 A C G T A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTKAAWACARTCY
ATTTGCATACAATGG
 A C G T A C G T A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTKAAWACARTCY
-----AACAAT--
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTKAAWACARTCY--
NWTAAYCYAATCAWN
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTKAAWACARTCY
NTTNAGAACAATTA
 A C G T A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTKAAWACARTCY
CCAAAAATAG---
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTKAAWACARTCY
-TGTAAACAGGA-
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTKAAWACARTCY
--TAATTTAATCA
 A G T C A C G T A C T G C T G A C G T A C G T A C G T A A G T C C T G A C T A G A C G T A G T C A G C T
A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A