Information for 18-DCCACACGTCTTBCCC (Motif 41)

C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G T C G A G T C A C G T A A T C G C G T A A G T C C T A G A G C T A C T G C G A T C T A G A T C G G A T C
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.763
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 25.3bp
Average Position of motif in Background60.5 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
--AACACGTGTT----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
----CACGTG------
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
---GCACGTAY-----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
----CACGTGBN----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
----CACGTGDC----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
---ACACGTGC-----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
---GCACGTNC-----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
----CACGTGNC----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
----CACGTGNT----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:DCCACACGTCTTBCCC
---TCACGTGC-----
 C A T G A T G C A G T C C G T A A G T C C T G A A G T C A C T G A C G T A T G C C G A T A C G T A C G T A G T C A G T C A T G C
A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T