Information for 12-GTTACTGGAGTTC (Motif 22)

A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C
Reverse Opposite:
T A C G C G T A G C T A G T A C C A G T T G A C T G A C G C T A A C T G C G A T T C G A C T G A A G T C
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.686
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif132.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets54.8 +/- 24.2bp
Average Position of motif in Background53.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTTACTGGAGTTC-
GGGTTACTANAGGTCA
 A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTTACTGGAGTTC-
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTACTGGAGTTC
CNNNGCTACTGTANNN-
 A C G T A C G T A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTTACTGGAGTTC--
TTGAATGAAATTCGA
 A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Vdr/MA0693.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTTACTGGAGTTC-
GAGTTCATTGAGTTCA
 A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTTACTGGAGTTC
TNNTGCTACTGTNNNN-
 A C G T A C G T A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GTTACTGGAGTTC-
AAGGTCACGAAAGGTCA
 A C G T A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T
C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GTTACTGGAGTTC-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GTTACTGGAGTTC
AGTCACGC------
 A C G T A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTTACTGGAGTTC--
TTTCCTGGAAAGNNN
 A C T G A G C T A G C T G C T A T G A C C A G T A C T G A C T G G C T A C A T G C G A T A C G T A T G C A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A