p-value: | 1e-9 |
log p-value: | -2.292e+01 |
Information Content per bp: | 1.647 |
Number of Target Sequences with motif | 90.0 |
Percentage of Target Sequences with motif | 13.64% |
Number of Background Sequences with motif | 3043.9 |
Percentage of Background Sequences with motif | 6.64% |
Average Position of motif in Targets | 49.8 +/- 25.7bp |
Average Position of motif in Background | 50.2 +/- 33.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.08 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0205.1_Zic1_2/Jaspar
Match Rank: | 1 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCTGCTG----- TNTCCTGCTGTGNNG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCTGCTG----- TCNCCTGCTGNGNNN |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCTGCTG----- NNTCCTGCTGTGNNN |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 4 |
Score: | 0.73 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGGCCTGCTG--- ---CCTGCTGAGH |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCCTGCTG-- CCCCCTGCTGTG |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGCCTGCTG--- TTGGCATGGTGCCA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGGCCTGCTG--- GGCCYCCTGCTGDGH |
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POL006.1_BREu/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGCCTGCTG -GGCGCGCT- |
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Zfx/MA0146.2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------TGGCCTGCTG GGGGCCGAGGCCTG--- |
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SREBF2/MA0596.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCCTGCTG ATGGGGTGAT- |
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