Information for 1-GGGTTACTCCCGGTCA (Motif 1)

C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A G T A C A G T C A C T G T A C G A T C G C G T A A C T G A C G T C T G A C G T A A G T C A G T C A G T C
p-value:1e-27
log p-value:-6.425e+01
Information Content per bp:1.942
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 13.6bp
Average Position of motif in Background24.7 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGGTTACTCCCGGTCA
GGGTTACTANAGGTCA
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTACTCCCGGTCA
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGTTACTCCCGGTCA-
--ACCACTCTCGGTCAC
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ELK1/MA0028.2/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGGTTACTCCCGGTCA
----NACTTCCGGT--
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T A C G T

ERF/MA0760.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGTTACTCCCGGTCA
----CACTTCCGGT--
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A T G C A G T C A C T G T C A G A G C T A C G T A C G T

ELK3/MA0759.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGTTACTCCCGGTCA
----NACTTCCGGT--
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T C G A A G T C C G A T A C G T T G A C A G T C A C T G A C T G G A C T A C G T A C G T

ETV3/MA0763.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGTTACTCCCGGTCA
----CACTTCCGGT--
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T C A G T G T A C G T A C C T A G C T A G A G C T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGTTACTCCCGGTCA
-GGTCANYTGAGGWCA
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

FEV/MA0156.2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGGTTACTCCCGGTCA
----NACTTCCGGT--
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T C G A T G T A C G A T C A C T G A C T G G C A T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGGTTACTCCCGGTCA
-----ACTTCCGGTT-
 C T A G A C T G A C T G A C G T A G C T C G T A A G T C A C G T T A G C A T G C G T A C A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T A C G T