Information for 5-ACAGCAGCTT (Motif 4)

C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
Reverse Opposite:
T G C A C T G A C A T G T G A C G C A T C T A G G A T C C A G T C T A G G C A T
p-value:1e-14
log p-value:-3.413e+01
Information Content per bp:1.673
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif12.46%
Number of Background Sequences with motif2400.8
Percentage of Background Sequences with motif5.30%
Average Position of motif in Targets41.3 +/- 25.9bp
Average Position of motif in Background49.3 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ACAGCAGCTT
NCAGCTGCTG
 C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCTT-
AGCAGCTGCTNN
 A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACAGCAGCTT
-CAGCTGNT-
 C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAGCTT
AGCAGCTGCT-
 A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

MSC/MA0665.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCTT
AACAGCTGTT-
 A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACAGCAGCTT
ACAGCTGTTV
 C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCTT--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCTT--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCTT
AACAGCTGCAG
 A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCTT
AACAGCTG---
 A C G T C G T A A G T C G T C A C T A G G A T C C G T A A C T G G T A C G A C T A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T