Information for 14-TCCSSRGAGG (Motif 20)

C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G
Reverse Opposite:
T A G C G T A C G C A T A T G C A G T C A T C G A T C G C A T G T C A G G C T A
p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.614
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif8.50%
Number of Background Sequences with motif1990.4
Percentage of Background Sequences with motif4.39%
Average Position of motif in Targets53.2 +/- 29.9bp
Average Position of motif in Background49.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCCSSRGAGG
----CGGAGC
 C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCSSRGAGG-
GTCCCCAGGGGA
 A C G T C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCCSSRGAGG----
----GGGAGGACNG
 C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCCSSRGAGG---
NNNACCGAGAGTNNN
 A C G T A C G T C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

GFX(?)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCSSRGAGG--
TCTCGCGAGAAT
 C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCSSRGAGG
TTCCNGGAAG
 C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCSSRGAGG
TTCCKNAGAA-
 A C G T C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCCSSRGAGG----
NTCCCCTCAGGGANT
 A C G T C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T A C G T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCSSRGAGG---
GTTCTCGCGAGANCC
 A C G T A C G T C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCSSRGAGG----
CTCTCGCGAGATCTG
 A C G T C G A T A G T C G T A C T A G C T A G C T C A G T A C G C G T A C A T G A T C G A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G